gacatag

I am Ali Oghabian, a Post-doc researcher/Bioinformatician working in the Neuromuscular diseases and Genetic Determinants of Osteoporosis research labs, at the University of Helsinki and Folkhälsan Research Center. The main purpose of this blog is to document and share technical Bioinformatics notes based on challenges that I face everyday in the lab.

In this post I show how groupScatterPlot(), function of the rnatoolbox R package can be used for plotting the individual values in several groups toge

plotting individual values within multiple groups together with their means

In this post I show how classifySex(), function of the rnatoolbox R package can be used for inferring the sex of the studied subjects from their bina

Inferring the sex of the subjects from RNAseq BAM files

Recently I have started to organize my commonly used functions related to quality assessment and analyzing RNAseq data into an R package.

Assessing the number of mapped reads in several bam files

adhan package: retrieving and aligning the prayer times in R

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About Me

gacatag: I am a Postdoc researcher at the Neuromuscular Disorders Research lab and Genetic Determinants of Osteoporosis Research lab, in University of Helsinki and Folkhälsan RC. I specialize in Bioinformatics. I am interested in Machine learning and multi-omics data analysis. My go-to programming language is R.

My Blog List

R-bloggers

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